BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B09SP1|AL426325
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1710 1586 0.0
>3x_Contig1710
Length = 16151
Score = 1586 bits (798), Expect = 0.0
Identities = 814/820 (99%), Gaps = 1/820 (0%)
Strand = Plus / Minus
Query: 1 accatcgcttgtacctaagtattcgaagcagttcacaagactactacggctgatttgcag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1531 accatcgcttgtaccaaagtattcgaagcagttcacaagactactacggctgatttgcag 1472
Query: 61 atagtacatccgaatcaatatttcgaaaggkcgagacaagctgccgccgctgttaccaca 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1471 atagtacatccgaatcaatatttcgaaaggtcgagacaagctgccgccgctgttaccaca 1412
Query: 121 acgaattgaattaggattagaaataatcgaactaaatttggaagagatgcgactttccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1411 acgaattgaattaggattagaaataatcgaactaaatttggaagagatgcgactttccct 1352
Query: 181 ggaaaaaaaagtgtaacgggtgtaccgaatcgacagaatattcgaaacgttccagagcaa 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 ggaaaaaaaagtgtaacgagtgtaccgaatcgacagaatattcgaaacgttccagagcaa 1292
Query: 241 aagcgtgtatgcgttaactgagcggagaagttgctattctaatctttccgatatcattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 aagcgtgtatgcgttaactgagcggagaagttgctattctaatctttccgatatcattgt 1232
Query: 301 cacggttgtgacactgtcgaagagaaaccatgctcatacggggcataacgagaatgcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 cacggttgtgacactgtcgaagagaaaccatgctcatacggggcataacgagaatgcaca 1172
Query: 361 tcttgaactaagtatatcaactgttgcagttacgtaatgcgagagcatgtacgtttagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 tcttgaactaagtatatcaactgttgcagttacgtaatgcgagagcatgtacgtttagca 1112
Query: 421 gcagtcaatagcgattgaataacaaaaattctcgctatatggaggatgattgaatggcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 gcagtcaatagcgattgaataacaaaaattctcgctatatggaggatgattgaatggcca 1052
Query: 481 ggcaaaattcagaattattgcaagccatgcgaa-sttgtcattccatgtcgtctcaagtg 539
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1051 ggcaaaattcagaattattgcaagccatgcgaagcttgtcattccatgtcgtctcaagtg 992
Query: 540 ccttatcattttgaaacaaccaagtaggtatgaatatgaaataaattattaggaaaccag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 ccttatcattttgaaacaaccaagtaggtatgaatatgaaataaattattaggaaaccag 932
Query: 600 tacccaattgatgtcccacatcgatataatcgatacataatcttatatccgtctgatctt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 tacccaattgatgtcccacatcgatataatcgatacataatcttatatccgtctgatctt 872
Query: 660 catcctggatcggttataccaagcacgaattcattacgtcagcatacatgctccagtacc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 catcctggatcggttataccaagcacgaattcattacgtcagcatacatgctccagtacc 812
Query: 720 acattgtattggcacagacgcmaattacttattctttgcaaaaacgatataaaagcgatg 779
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 811 acattgtattggcacagacgcaaattacttattctttgcaaaaacgatataaaagcgatg 752
Query: 780 catgattccgaggagatacacagtacgaaataaacccagg 819
||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 catgattccgaggagatacacagtacgaaataaacccagg 712
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4994
Number of Sequences: 1807
Number of extensions: 4994
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)